Basic Information
Locus ID:
GOSA_00007049
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
CSC1-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig257 | 4550641 | 4561552 | - | GOSA_00007049 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.16 | 68,925.55 Da | 37.76 | 116.47 | 0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 487 | 608 | 5.6E-29 | IPR003864 |
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 188 | 343 | 3.1E-26 | IPR027815 |
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 6 | 167 | 5.1E-40 | IPR032880 |
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 356 | 435 | 5.7E-15 | IPR003864 |
| Coils | Coil | Coil | 275 | 295 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01100.2 | hypothetical protein 1. unknown protein, has cDNAs and ESTs associated to it | 0 |
| RefSeq | XP_010670229.2 | CSC1-like protein HYP1 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8GUH7 | CSC1-like protein HYP1 OS=Arabidopsis thaliana OX=3702 GN=HYP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RN22 | CSC1-like protein HYP1 OS=Spinacia oleracea OX=3562 GN=SOVF_052690 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology