Basic Information
Locus ID:
GOSA_00006436
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig52 | 3072462 | 3076779 | - | GOSA_00006436 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.14 | 22,763.76 Da | 78.53 | 27.17 | -1.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 114 | 133 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 198 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 113 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59800.2 | - | 0 |
| RefSeq | XP_021774800.1 | zinc finger Ran-binding domain-containing protein 2-like [Chenopodium quinoa] | 0 |
| TrEMBL | A0A0K9RIT0 | Protein FAM133-like OS=Spinacia oleracea OX=3562 GN=SOVF_061970 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_15765 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah019633 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_3g058870 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg38482, Sbi_jg6586 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg15339 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00006436 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl07045 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000012033, gene:ENSEOMG00000029428 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.3AG0011070, CQ.Regalona.r1.3BG0011290 |
| Anacardiaceae | Pistacia vera | 7 | pistato.v30111880, pistato.v30247470, pistato.v30247500 ... |
| Apiaceae | Apium graveolens | 1 | Ag11G03680 |
| Arecaceae | Cocos nucifera | 1 | COCNU_02G012380 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103708592 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_02.496.V1.1, AsparagusV1_09.514.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri2G20379 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT2G43795.2, AT3G59800.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10006256m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp4g25870.v2.2, Sp5g03340.v2.2 |
| Brassicaceae | Brassica nigra | 15 | BniB03g056530.2N, BniB03g056590.2N, BniB05g054940.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G0310 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl07G0312 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno04g02360, gene.Cymno04g17100 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0165s00019.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g07030 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-12112, nbisL1-mrna-4296 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG11.511 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00025103 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb7G33588 |
| Poaceae | Echinochloa crus-galli | 3 | AH09.1435, BH09.1616, CH09.1800 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0312050, gene-QOZ80_4BG0343380 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0178440.1 |
| Poaceae | Oryza coarctata | 2 | Oco07G009640, Oco08G009440 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g41920.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G147600 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0302246, Pt_Chr0302284 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr23G009710, Chr25G009970, Chr26G010040, Chr30G009760 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G611800 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC2AG051130 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G353200.1, TraesCS2B02G371100.1 ... |
| Poaceae | Zea mays | 3 | Zm00001eb078530_P006, Zm00001eb412540_P001 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-36978, nbis-gene-5160 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g19980, Zma_g21541 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG06.1515, evm.TU.LG11.879 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc01g05380, gene.Posoc07g13590 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_3_RagTag.1549 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-18245 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-2766 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000019l.299 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00001829 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-5402 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-12920 |
| Salicaceae | Populus euphratica | 2 | populus_peu22498, populus_peu23883 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132636063 |
| Solanaceae | Solanum chilense | 1 | SOLCI004186600 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107007680 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.14316_chr08_- |
| Tamaricaceae | Tamarix chinensis | 1 | TC12G1849 |
| Zosteraceae | Zostera marina | 1 | Zosma01g26140.v3.1 |