Basic Information
Locus ID:
GOSA_00006392
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig52 | 2714152 | 2716877 | - | GOSA_00006392 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 64,690.88 Da | 31.43 | 87.55 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 51 | 323 | 1.2E-35 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 397 | 583 | 1.4E-31 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 33 | 356 | 5.12E-66 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 369 | 583 | 1.78E-58 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 480 | 583 | 3.0E-29 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 14 | 128 | 6.9E-23 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 372 | 479 | 2.2E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 132 | 340 | 4.6E-54 | - |
| SMART | SM00220 | serkin_6 | 394 | 583 | 1.6E-9 | IPR000719 |
| SMART | SM00220 | serkin_6 | 49 | 327 | 6.6E-17 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 49 | 328 | 31.792326 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 394 | 583 | 30.209318 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 177 | 189 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 400 | 432 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01300.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_048497129.1 | probable disease resistance protein At4g27220 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SRH7 | Serine/threonine-protein kinase PBL35 OS=Arabidopsis thaliana OX=3702 GN=PBL35 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6R9R6 | Protein kinase domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_014097 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 7 | gene_15779, gene_15780, gene_15781, gene_15782, gene_15783 ... |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_3g058420 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00006392, GOSA_00006398 |