Basic Information
Locus ID:
GOSA_00006301
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Short Name:
CPK24
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig52 | 1935313 | 1938186 | + | GOSA_00006301 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 62,110.50 Da | 44.20 | 84.95 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 446 | 511 | 3.09088E-16 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 68 | 326 | 2.54994E-135 | - |
| Pfam | PF13833 | EF-hand domain pair | 387 | 434 | 5.1E-9 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 445 | 510 | 1.5E-10 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 69 | 327 | 2.8E-77 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 51 | 355 | 3.37E-87 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 367 | 511 | 1.63E-39 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 155 | 335 | 2.6E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 71 | 154 | 8.6E-29 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 336 | 513 | 4.1E-48 | - |
| SMART | SM00054 | efh_1 | 485 | 513 | 2.5E-4 | IPR002048 |
| SMART | SM00220 | serkin_6 | 69 | 327 | 3.1E-101 | IPR000719 |
| SMART | SM00054 | efh_1 | 446 | 474 | 0.0023 | IPR002048 |
| SMART | SM00054 | efh_1 | 410 | 438 | 2.6 | IPR002048 |
| SMART | SM00054 | efh_1 | 374 | 402 | 3.7E-5 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 481 | 516 | 13.062845 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 406 | 441 | 8.292731 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 69 | 327 | 49.431557 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 442 | 477 | 11.75176 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 370 | 405 | 15.82449 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 189 | 201 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 75 | 98 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 383 | 395 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 419 | 431 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 455 | 467 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 494 | 506 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 46 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31500.1 | calcium-dependent protein kinase 24. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_010671825.1 | calcium-dependent protein kinase 24 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SIQ7 | Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=CPK24 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803KTC5 | Calcium-dependent protein kinase 24 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology