Basic Information
Locus ID:
GOSA_00006231
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig52 | 1317102 | 1327145 | + | GOSA_00006231 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 86,043.40 Da | 50.82 | 70.58 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 505 | 751 | 1.36799E-127 | - |
| CDD | cd00130 | PAS | 136 | 237 | 8.13752E-14 | IPR000014 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 499 | 751 | 7.9E-68 | IPR001245 |
| Pfam | PF00989 | PAS fold | 131 | 237 | 4.1E-13 | IPR013767 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 131 | 234 | 4.01E-19 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 485 | 750 | 1.04E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 492 | 576 | 3.0E-31 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 137 | 241 | 5.0E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 577 | 775 | 4.9E-62 | - |
| SMART | SM00091 | pas_2 | 127 | 193 | 6.8E-7 | IPR000014 |
| SMART | SM00220 | serkin_6 | 499 | 759 | 2.3E-56 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 131 | 237 | 2.1E-12 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 499 | 759 | 43.22673 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 125 | 196 | 13.032768 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 618 | 630 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 722 | 744 | 1.8E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 573 | 586 | 1.8E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 678 | 700 | 1.8E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 612 | 630 | 1.8E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 659 | 669 | 1.8E-11 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 364 | 383 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 405 | 449 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 320 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 249 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 104 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 413 | 427 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 114 | - | - |
| Coils | Coil | Coil | 6 | 26 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06620.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_021774294.1 | tyrosine-protein kinase receptor UFO-like [Chenopodium quinoa] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803N2C5 | PAS domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology