Basic Information
Locus ID:
GOSA_00005968
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig60 | 3563259 | 3566990 | + | GOSA_00005968 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 70,947.83 Da | 38.78 | 91.23 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01476 | LysM domain | 61 | 109 | 0.19 | IPR018392 |
| Pfam | PF01476 | LysM domain | 195 | 222 | 0.021 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 346 | 610 | 1.6E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 324 | 613 | 2.7E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 316 | 414 | 7.1E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 415 | 626 | 5.4E-55 | - |
| SMART | SM00257 | LysM_2 | 60 | 109 | 0.1 | IPR018392 |
| SMART | SM00257 | LysM_2 | 126 | 172 | 9.7 | IPR018392 |
| SMART | SM00220 | serkin_6 | 344 | 615 | 6.8E-42 | IPR000719 |
| SMART | SM00257 | LysM_2 | 191 | 243 | 8.4 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 344 | 616 | 38.124359 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 350 | 372 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 459 | 471 | - | IPR008271 |
| Coils | Coil | Coil | 360 | 380 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_021850694.1 | lysM domain receptor-like kinase 3 [Spinacia oleracea] | 0 |
| Q6UD73 | LysM domain receptor-like kinase 3 OS=Medicago truncatula OX=3880 GN=LYK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RWX1 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_024950 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology