Basic Information
Locus ID:
GOSA_00005836
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig60 | 2375488 | 2383409 | - | GOSA_00005836 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.41 | 106,419.40 Da | 32.73 | 94.33 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 624 | 902 | 2.60267E-88 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 67 | 2.9E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 620 | 899 | 3.2E-42 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 150 | 209 | 4.7E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 604 | 927 | 6.83E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 44 | 388 | 1.48E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 184 | 290 | 1.0E-25 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 694 | 928 | 3.8E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 291 | 383 | 1.7E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 183 | 1.4E-38 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 589 | 693 | 7.9E-33 | - |
| SMART | SM00369 | LRR_typ_2 | 196 | 222 | 73.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 315 | 339 | 1.4 | IPR003591 |
| SMART | SM00220 | serkin_6 | 618 | 905 | 4.3E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 124 | 148 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 172 | 195 | 210.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 618 | 905 | 35.961857 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 738 | 750 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 624 | 646 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010683435.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9R8K6 | Protein kinase domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_094150 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology