Basic Information
Locus ID:
GOSA_00005697
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig60 | 716207 | 740162 | + | GOSA_00005697 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.01 | 124,732.43 Da | 45.13 | 79.27 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15539 | PHD1_AIRE | 779 | 819 | 1.05457E-18 | - |
| Pfam | PF16135 | Tify domain binding domain | 371 | 426 | 2.1E-10 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 713 | 762 | 2.6E-16 | IPR032308 |
| Pfam | PF00628 | PHD-finger | 780 | 821 | 3.2E-8 | IPR019787 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 764 | 820 | 2.26E-14 | IPR011011 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 1023 | 1108 | 1.57E-5 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 866 | 921 | 3.91E-9 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 863 | 926 | 5.7E-12 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 766 | 857 | 5.7E-18 | IPR013083 |
| SMART | SM00249 | PHD_3 | 779 | 820 | 5.1E-11 | IPR001965 |
| SMART | SM00249 | PHD_3 | 867 | 923 | 0.0025 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 777 | 822 | 10.273199 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 780 | 819 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 589 | 605 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 569 | 588 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 218 | 232 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 211 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 526 | 678 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 607 | 621 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 623 | 641 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 642 | 657 | - | - |
| Coils | Coil | Coil | 86 | 106 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27980.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_021774585.1 | uncharacterized protein LOC110738482 [Chenopodium quinoa] | 0 |
| Q14839 | Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens OX=9606 GN=CHD4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9QNE0 | PHD-type domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_164770 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology