Basic Information
Locus ID:
GOSA_00005657
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
SRSF protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig60 | 106948 | 107874 | + | GOSA_00005657 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.11 | 21,477.38 Da | 51.20 | 75.53 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 9 | 113 | 8.69E-14 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 11 | 103 | 4.0E-23 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 124 | 140 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 190 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 147 | 181 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53030.1 | ser/arg-rich protein kinase 4. Encodes a protein kinase SRPK4 that specifically targets Arabidopsis Ser/Arg-rich (SR) slicing factors involved in RNA metabolism. In vitro kinase assay showed that SRPK4 phosphorylates the SR protein RSp31. | 0 |
| RefSeq | XP_010683926.2 | serine/threonine-protein kinase SRPK [Beta vulgaris subsp. vulgaris] | 0 |
| Q96SB4 | SRSF protein kinase 1 OS=Homo sapiens OX=9606 GN=SRPK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803MZR6 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah030804 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00005657 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000006101, gene:ENSEOMG00000039927 ... |
| Arecaceae | Cocos nucifera | 3 | COCNU_03G000600, COCNU_09G005480, scaffold057081G000010 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC120106072 |
| Brassicaceae | Brassica nigra | 1 | BniB02g013860.2N |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G1007 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g15450 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-6928 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-6120 |
| Salicaceae | Populus euphratica | 1 | populus_peu23229 |