Basic Information
Locus ID:
GOSA_00005462
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Short Name:
PHOT2
Description:
phototropin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig156 | 3632309 | 3639651 | - | GOSA_00005462 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.28 | 47,407.31 Da | 39.61 | 90.43 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 150 | 376 | 2.1E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 97 | 403 | 1.62E-58 | IPR011009 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 1 | 55 | 8.2E-8 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 151 | 165 | 2.2E-60 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 166 | 384 | 2.2E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 99 | 149 | 6.5E-7 | - |
| SMART | SM00220 | serkin_6 | 113 | 376 | 3.2E-49 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 64 | 376 | 30.435461 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 203 | 215 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58140.1 | phototropin 2. Membrane-bound protein serine/threonine kinase that functions as blue light photoreceptor in redundancy with PHO1. Involved in stomatal opening, chloroplast movement and phototropism. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT2 possesses two LOV (LOV1 and LOV2, for light-oxygen-voltage-sensing) domains involved in FMN-binding and a C-terminus forming a serine/threonine kinase domain. LOV2 acts as an inhibitor of phototropin kinase in the dark, and light cancels the inhibition through cysteine-FMN adduct formation. LOV1 in contrast acts as an attenuator of photoactivation. Localized to the Golgi apparatus under the induction of blue light. | 0 |
| RefSeq | XP_021842496.1 | phototropin-2 isoform X3 [Spinacia oleracea] | 0 |
| P93025 | Phototropin-2 OS=Arabidopsis thaliana OX=3702 GN=PHOT2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A126WWG0 | Putative LOV domain-containing protein OS=Ouret lanata OX=292353 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00005462 |
| Anacardiaceae | Pistacia vera | 18 | pistato.v30103110, pistato.v30104160, pistato.v30104180 ... |
| Apiaceae | Apium graveolens | 1 | Ag5G00025 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.2260.V1.1 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb5G28350 |
| Poaceae | Echinochloa crus-galli | 1 | AH04.12 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-41285 |