Basic Information
Locus ID:
GOSA_00005213
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig156 | 1505682 | 1506139 | - | GOSA_00005213 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.62 | 12,269.01 Da | 41.59 | 102.11 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 7 | 98 | 1.6E-21 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 98 | 5.8E-36 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 101 | 1.3E-36 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 109 | 22.209473 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 30 | 42 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53430.2 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_021800755.1 | probable LRR receptor-like serine/threonine-protein kinase At1g53420, partial [Prunus avium] | 0 |
| C0LGG9 | Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana OX=3702 GN=At1g53440 PE=2 SV=2 | 0 | |
| TrEMBL | A0A392NXE9 | Receptor-like protein kinase (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0025535 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00005213 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.4AG0017500 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30071510, pistato.v30107630 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10029082m.g.v1.0 |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq01G0879, Ceq04G0498 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno17g01540 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G159500 |