Basic Information
Locus ID:
GOSA_00005158
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
ATP-dependent DNA helicase Q-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig156 | 1135345 | 1147381 | + | GOSA_00005158 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.37 | 81,691.56 Da | 44.93 | 69.55 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00270 | DEAD/DEAH box helicase | 463 | 537 | 9.6E-10 | IPR011545 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 440 | 523 | 6.33E-19 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 422 | 566 | 2.9E-37 | IPR027417 |
| SMART | SM00487 | ultradead3 | 457 | 680 | 0.0024 | IPR014001 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 659 | 680 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 539 | 553 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 533 | 561 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 665 | 680 | - | - |
| Coils | Coil | Coil | 304 | 331 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G10930.1 | DNA helicase (RECQl4A). DNA helicase involved in the maintenance of genome stability by modulation of the DNA damage response and suppression of homologous recombination. | 0 |
| RefSeq | XP_021736695.1 | ATP-dependent DNA helicase Q-like 4A [Chenopodium quinoa] | 0 |
| Q8L840 | ATP-dependent DNA helicase Q-like 4A OS=Arabidopsis thaliana OX=3702 GN=RECQL4A PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LN05 | DNA helicase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology