Basic Information
Locus ID:
GOSA_00005084
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
mitotic sister chromatid cohesion
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig156 | 514738 | 523868 | - | GOSA_00005084 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 59,947.97 Da | 45.25 | 84.28 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 407 | 448 | 1.4E-6 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 37 | 248 | 9.75E-6 | IPR016024 |
| Gene3D | G3DSA:2.30.30.140 | - | 401 | 456 | 2.1E-12 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 397 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 492 | 512 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 278 | 296 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 325 | 343 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 520 | 540 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 492 | 540 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 366 | 397 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15940.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_021866448.1 | uncharacterized protein LOC110805132 isoform X1 [Spinacia oleracea] | 0 |
| Q9S9P0 | Sister chromatid cohesion protein PDS5 homolog E OS=Arabidopsis thaliana OX=3702 GN=PDS5E PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RUR0 | Tudor domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_026500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology