Basic Information
Locus ID:
GOSA_00004946
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig87 | 4705773 | 4709815 | + | GOSA_00004946 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.83 | 28,616.10 Da | 39.98 | 93.16 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 17 | 257 | 4.5E-58 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 12 | 257 | 3.79E-61 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 5 | 261 | 1.2E-77 | IPR036589 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 4 | 263 | 36.328671 | IPR003726 |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_021770317.1 | homocysteine S-methyltransferase 2-like isoform X1 [Chenopodium quinoa] | 0 |
| Q9M1W4 | Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=HMT-2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QBT1 | Hcy-binding domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_197130 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology