Basic Information
Locus ID:
GOSA_00004480
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig87 | 265821 | 270646 | - | GOSA_00004480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.37 | 59,412.45 Da | 44.77 | 90.82 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 369 | 533 | 2.8E-30 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 346 | 538 | 4.1E-55 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 347 | 446 | 3.5E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 447 | 542 | 5.0E-27 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 369 | 550 | 28.62631 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 375 | 397 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 493 | 505 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 283 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 323 | 352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 335 | 349 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02010.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010679396.1 | serine/threonine-protein kinase PBL36 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8RWW0 | Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana OX=3702 GN=ALE2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M7H4 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg12834, jg27667 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_19259 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah000101 |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_1g009000, BVRB_5g121910 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg31318, Sbi_jg57963 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg25592 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00004479, GOSA_00004480 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl54535, Sgl59876 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000006642, gene:ENSEOMG00000022785 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.5AG0027050, CQ.Regalona.r1.5BG0028680 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30008040 |
| Apiaceae | Apium graveolens | 1 | Ag10G01772 |
| Arecaceae | Cocos nucifera | 2 | COCNU_04G011160, COCNU_16G004550 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103700983, gene-LOC103720662 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.1253.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri9G32776 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G02010.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10028470m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g01890.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB08g040400.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq06G1054 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G1096 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno02g18130 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate07g09690 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-6223, nbisL1-mrna-6224 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG04.462 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00000614, Pov_00025482 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb2G10131 |
| Poaceae | Echinochloa crus-galli | 3 | AH02.1003, BH02.1123, CH02.1175 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_1AG0005450, gene-QOZ80_1BG0054080 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0252820.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_052095 |
| Poaceae | Oryza coarctata | 2 | Oco01G006770, Oco02G007070 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g14932.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G103400 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0604161 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr03G002160, Chr08G002910 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G301700 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3AG023800 |
| Poaceae | Triticum aestivum | 3 | TraesCS3A02G171600.1, TraesCS3B02G202600.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb127580_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-32414 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g7419 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG02.1256, evm.TU.LG09.714 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc02g07170 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_9_RagTag.740 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-21480 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-18968 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-18550, nbisL1-mrna-18551 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000003l.633 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00009329 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-1616 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-5300 |
| Salicaceae | Populus euphratica | 2 | populus_peu27362, populus_peu31344 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132644926 |
| Solanaceae | Solanum chilense | 1 | SOLCI000869000 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107007851 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_16391 |
| Tamaricaceae | Tamarix chinensis | 1 | TC07G2828 |
| Zosteraceae | Zostera marina | 2 | Zosma06g21730.v3.1, Zosma06g21740.v3.1 |