Basic Information
Locus ID:
GOSA_00004410
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
WRKY Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig199 | 5583208 | 5584783 | - | GOSA_00004410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.30 | 36,627.82 Da | 45.29 | 49.24 | -1.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 210 | 267 | 3.6E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 42 | 97 | 8.4E-26 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 39 | 100 | 1.44E-26 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 201 | 269 | 3.79E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 194 | 270 | 1.9E-35 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 34 | 101 | 9.4E-29 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 41 | 99 | 5.8E-37 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 209 | 268 | 8.0E-38 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 36 | 100 | 24.133591 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 204 | 269 | 37.676926 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 277 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 141 | 165 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.2 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_021770867.1 | probable WRKY transcription factor 4 [Chenopodium quinoa] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9QGS9 | WRKY transcription factor OS=Spinacia oleracea OX=3562 GN=SOVF_180300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology