Basic Information
Locus ID:
GOSA_00004314
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Domain of unknown function (DUF569)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig199 | 4491762 | 4496155 | + | GOSA_00004314 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 60,795.19 Da | 47.54 | 71.59 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04601 | Domain of unknown function (DUF569) | 227 | 370 | 4.4E-63 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 1 | 143 | 5.1E-53 | IPR007679 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 231 | 374 | 2.22E-21 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 8 | 145 | 1.7E-20 | IPR008999 |
| Gene3D | G3DSA:2.80.10.50 | - | 234 | 357 | 1.7E-14 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 5 | 146 | 1.4E-14 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 196 | 217 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 201 | 217 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G27100.1 | Actin cross-linking protein. | 0 |
| RefSeq | XP_048494232.1 | uncharacterized protein LOC104887415 isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A0K9RBQ9 | DUF569 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_088580 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology