Basic Information
Locus ID:
GOSA_00002952
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
proteinaceous RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig130 | 1723964 | 1731739 | + | GOSA_00002952 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.64 | 59,825.97 Da | 40.25 | 72.94 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18718 | PIN_PRORP | 309 | 430 | 3.53223E-50 | - |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 2 | 208 | 2.9E-71 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 254 | 433 | 6.8E-46 | IPR031595 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 8 | 268 | 4.4E-186 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 269 | 431 | 4.4E-186 | - |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 121 | 155 | 8.560833 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 468 | 530 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 530 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16650.1 | proteinaceous RNase P 2. | 0 |
| RefSeq | XP_021845485.1 | proteinaceous RNase P 2-like [Spinacia oleracea] | 0 |
| Q680B9 | Proteinaceous RNase P 2 OS=Arabidopsis thaliana OX=3702 GN=PRORP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QJK6 | ribonuclease P OS=Spinacia oleracea OX=3562 GN=SOVF_171910 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology