Basic Information
Locus ID:
GOSA_00002937
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Alkaline neutral invertase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig130 | 1556182 | 1559640 | + | GOSA_00002937 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.13 | 74,406.88 Da | 57.94 | 84.39 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12899 | Alkaline and neutral invertase | 546 | 617 | 5.4E-24 | IPR024746 |
| Pfam | PF12899 | Alkaline and neutral invertase | 141 | 520 | 4.0E-181 | IPR024746 |
| SUPERFAMILY | SSF48208 | Six-hairpin glycosidases | 145 | 610 | 7.83E-44 | IPR008928 |
| Gene3D | G3DSA:1.50.10.10 | - | 171 | 513 | 2.5E-9 | IPR012341 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22510.1 | alkaline/neutral invertase. Encodes a chloroplast-targeted alkaline/neutral invertase that is implicated in the development of the photosynthetic apparatus and nitrogen assimilation in seedlings to control the sucrose to hexose ratio. | 0 |
| RefSeq | XP_010686069.2 | neutral/alkaline invertase 3, chloroplastic [Beta vulgaris subsp. vulgaris] | 0 |
| Q6H6N5 | Neutral/alkaline invertase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=NIN3 PE=2 SV=1 | 0 | |
| TrEMBL | Q8L6W3 | Alkaline/neutral invertase OS=Beta vulgaris OX=161934 GN=ninv PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology