Basic Information
Locus ID:
GOSA_00002872
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig130 | 1045573 | 1046953 | + | GOSA_00002872 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 43,017.16 Da | 38.26 | 96.56 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 117 | 370 | 1.90957E-90 | - |
| Pfam | PF00069 | Protein kinase domain | 115 | 369 | 7.6E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 87 | 372 | 2.29E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 88 | 183 | 8.6E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 184 | 380 | 2.8E-50 | - |
| SMART | SM00220 | serkin_6 | 111 | 375 | 1.7E-29 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 24 | 382 | 8.7E-39 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 111 | 375 | 35.099682 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 229 | 241 | - | IPR008271 |
| Coils | Coil | Coil | 56 | 86 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12000.2 | - | 0 |
| RefSeq | XP_048489678.1 | U-box domain-containing protein 52-like [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SW11 | U-box domain-containing protein 35 OS=Arabidopsis thaliana OX=3702 GN=PUB35 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803KR56 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology