Basic Information
Locus ID:
GOSA_00002858
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig130 | 875052 | 878668 | - | GOSA_00002858 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.20 | 122,563.54 Da | 36.27 | 97.54 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 164 | 389 | 5.6E-25 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 516 | 1050 | 5.44E-25 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 156 | 413 | 4.55E-29 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 497 | 743 | 1.5E-22 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 146 | 310 | 2.1E-20 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 314 | 405 | 7.0E-6 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 854 | 1059 | 2.0E-11 | IPR032675 |
| PRINTS | PR00364 | Disease resistance protein signature | 256 | 270 | 1.2E-13 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 941 | 957 | 1.2E-13 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 179 | 194 | 1.2E-13 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 355 | 369 | 1.2E-13 | - |
| Coils | Coil | Coil | 28 | 48 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G63020.1 | Disease resistance protein (CC-NBS-LRR class) family. | 0 |
| RefSeq | XP_021716652.1 | uncharacterized protein LOC110684505 [Chenopodium quinoa] | 0 |
| Q8RXS5 | Probable disease resistance protein At5g63020 OS=Arabidopsis thaliana OX=3702 GN=At5g63020 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5B6Z5Z3 | NB-ARC domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_008915 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology