Basic Information
Locus ID:
GOSA_00002550
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig111 | 7214649 | 7218257 | - | GOSA_00002550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 75,690.84 Da | 39.55 | 84.11 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 321 | 585 | 4.62785E-91 | - |
| Pfam | PF00069 | Protein kinase domain | 316 | 581 | 1.6E-46 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 166 | 245 | 2.6E-7 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 40 | 131 | 1.4E-14 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 298 | 588 | 2.29E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 392 | 607 | 1.4E-56 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 30 | 134 | 7.7E-17 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 292 | 391 | 1.1E-29 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 148 | 248 | 2.2E-12 | IPR038408 |
| SMART | SM00220 | serkin_6 | 315 | 583 | 2.7E-28 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 31 | 135 | 15.212504 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 315 | 594 | 35.806381 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 145 | 249 | 12.47877 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 321 | 343 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 434 | 446 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24540.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010682481.2 | proline-rich receptor-like protein kinase PERK15 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8GWJ7 | Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana OX=3702 GN=CRK19 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9R1P5 | Protein kinase domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_117030 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_18060, gene_18061 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah013809 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g147530 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg45383 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg11246 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00002550 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl35133, Sgl40507 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG13.116 |