Basic Information
Locus ID:
GOSA_00002252
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig111 | 4331024 | 4339610 | + | GOSA_00002252 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.87 | 105,724.85 Da | 28.61 | 94.55 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 642 | 909 | 4.62821E-94 | - |
| Pfam | PF00069 | Protein kinase domain | 637 | 904 | 4.9E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 622 | 929 | 5.26E-78 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 291 | 400 | 7.48E-10 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 39 | 304 | 1.05E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 189 | 288 | 2.3E-18 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 609 | 711 | 2.5E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 712 | 932 | 5.7E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 289 | 405 | 2.8E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 188 | 2.9E-39 | IPR032675 |
| SMART | SM00220 | serkin_6 | 636 | 913 | 5.3E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 636 | 910 | 38.138493 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 642 | 664 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 756 | 768 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 916 | 960 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 916 | 942 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010682077.2 | leucine-rich repeat receptor protein kinase HPCA1 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MMK0 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology