Basic Information
Locus ID:
GOSA_00002198
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig111 | 3870874 | 3876580 | - | GOSA_00002198 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 127,706.49 Da | 39.16 | 102.23 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 782 | 1041 | 7.14121E-88 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 601 | 620 | 1.7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 66 | 1.8E-11 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 778 | 977 | 1.5E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 756 | 1042 | 1.62E-73 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 74 | 393 | 6.83E-49 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 291 | 674 | 1.42E-43 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 276 | 406 | 1.4E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 192 | 275 | 2.7E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 425 | 691 | 3.2E-48 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 852 | 1056 | 4.3E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 740 | 851 | 5.8E-28 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 191 | 1.7E-44 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 647 | 673 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 240 | 264 | 12.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 776 | 1048 | 3.0E-37 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 551 | 575 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 329 | 353 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 93 | 117 | 67.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 599 | 623 | 13.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 625 | 646 | 7.126702 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 776 | 1048 | 38.364635 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 896 | 908 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 782 | 804 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 356 | 369 | 6.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 599 | 612 | 6.1E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_010682896.2 | LRR receptor-like serine/threonine-protein kinase RPK2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LR58 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology