Basic Information
Locus ID:
GOSA_00002085
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Short Name:
WRKY4
Description:
WRKY Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig111 | 2566952 | 2571739 | + | GOSA_00002085 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.47 | 58,644.09 Da | 62.93 | 49.13 | -1.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 412 | 475 | 5.1E-22 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 240 | 296 | 4.9E-26 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 237 | 298 | 1.1E-26 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 403 | 477 | 1.44E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 396 | 478 | 1.6E-33 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 223 | 299 | 1.9E-28 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 411 | 476 | 3.9E-37 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 239 | 297 | 6.2E-38 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 240 | 298 | 25.46497 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 406 | 477 | 34.371433 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 287 | 394 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 349 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 200 | 238 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 200 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 287 | 307 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 350 | 387 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G03340.1 | WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3). | 0 |
| RefSeq | XP_021739996.1 | probable WRKY transcription factor 3 [Chenopodium quinoa] | 0 |
| Q9ZQ70 | Probable WRKY transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=WRKY3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9R3N8 | WRKY transcription factor 3 OS=Spinacia oleracea OX=3562 GN=SOVF_110580 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology