Basic Information
Locus ID:
GOSA_00001878
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Lymphoid organ expressed yellow head virus receptor protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig38 | 9644593 | 9650669 | + | GOSA_00001878 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.37 | 52,097.05 Da | 41.64 | 67.11 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 266 | 349 | 1.1E-25 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 380 | 448 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 133 | 159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 233 | 247 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 408 | 435 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 258 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 225 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 324 | 365 | - | - |
| Coils | Coil | Coil | 281 | 311 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_021858992.1 | protein WVD2-like 4 [Spinacia oleracea] | 0 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9QG30 | TPX2 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_182970 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology