Basic Information
Locus ID:
GOSA_00001639
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig38 | 5805400 | 5808444 | - | GOSA_00001639 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.80 | 110,788.54 Da | 46.03 | 66.30 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 191 | 274 | 8.3805E-29 | - |
| Pfam | PF00855 | PWWP domain | 188 | 274 | 8.7E-20 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 184 | 291 | 9.03E-29 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 178 | 285 | 1.4E-27 | - |
| SMART | SM00293 | PWWP_4 | 188 | 249 | 3.0E-10 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 190 | 251 | 14.174075 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 435 | 477 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 816 | 833 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 654 | 676 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 734 | 835 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 642 | 681 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 503 | 548 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 435 | 571 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 405 | 424 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 736 | 752 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 157 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 929 | 960 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 782 | 800 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 933 | 947 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 29 | 185 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 406 | 420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 76 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 158 | 181 | - | - |
| Coils | Coil | Coil | 778 | 798 | - | - |
| Coils | Coil | Coil | 991 | 1011 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40340.2 | - | 0 |
| RefSeq | XP_021765690.1 | uncharacterized protein LOC110730216 [Chenopodium quinoa] | 0 |
| Q9FNE4 | PWWP domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PDP3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LU53 | PWWP domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology