Basic Information
Locus ID:
GOSA_00001454
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Belongs to the ubiquitin-activating E1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig38 | 3712097 | 3720827 | - | GOSA_00001454 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 121,249.09 Da | 37.35 | 84.86 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01490 | Ube1_repeat2 | 506 | 1045 | 0.0 | - |
| CDD | cd01491 | Ube1_repeat1 | 89 | 474 | 2.69368E-147 | - |
| Pfam | PF10585 | Ubiquitin-activating enzyme active site | 674 | 927 | 6.7E-84 | IPR019572 |
| Pfam | PF00899 | ThiF family | 91 | 465 | 2.8E-29 | IPR000594 |
| Pfam | PF09358 | Ubiquitin fold domain | 998 | 1087 | 1.0E-22 | IPR018965 |
| Pfam | PF00899 | ThiF family | 487 | 986 | 7.0E-73 | IPR000594 |
| Pfam | PF16191 | Ubiquitin-activating enzyme E1 four-helix bundle | 336 | 405 | 2.9E-21 | IPR032420 |
| Pfam | PF16190 | Ubiquitin-activating enzyme E1 FCCH domain | 264 | 334 | 9.9E-27 | IPR032418 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 482 | 982 | 1.57E-129 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 85 | 471 | 1.44E-96 | IPR035985 |
| Gene3D | G3DSA:3.10.290.60 | - | 1000 | 1090 | 7.2E-22 | IPR038252 |
| Gene3D | G3DSA:3.40.50.12550 | - | 208 | 497 | 8.3E-110 | - |
| Gene3D | G3DSA:3.50.50.80 | - | 81 | 198 | 3.8E-37 | IPR042449 |
| Gene3D | G3DSA:1.10.10.2660 | - | 659 | 934 | 1.3E-193 | IPR042063 |
| Gene3D | G3DSA:2.40.30.180 | - | 252 | 333 | 8.3E-110 | IPR042302 |
| Gene3D | G3DSA:3.40.50.720 | - | 507 | 985 | 1.3E-193 | - |
| SMART | SM00985 | UBA_e1_C_a_2 | 965 | 1087 | 2.1E-49 | IPR018965 |
| TIGRFAM | TIGR01408 | Ube1: ubiquitin-activating enzyme E1 | 85 | 1092 | 0.0 | IPR018075 |
| ProSitePatterns | PS00536 | Ubiquitin-activating enzyme signature 1. | 449 | 457 | - | IPR018074 |
| ProSitePatterns | PS00865 | Ubiquitin-activating enzyme active site. | 666 | 674 | - | IPR033127 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 534 | 557 | 3.0E-64 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 581 | 606 | 3.0E-64 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 735 | 762 | 3.0E-64 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 226 | 253 | 3.0E-64 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 111 | 135 | 3.0E-64 | IPR000011 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G30110.1 | ubiquitin-activating enzyme 1. Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. Mutant is able to revert the constitutive defense responses phenotype of snc1, which indicates the gene is involved in defense response. It also indicates that ubiquitination plays a role in plant defense signalling. | 0 |
| RefSeq | XP_021769666.1 | ubiquitin-activating enzyme E1 2-like [Chenopodium quinoa] | 0 |
| P93028 | Ubiquitin-activating enzyme E1 1 OS=Arabidopsis thaliana OX=3702 GN=UBA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MK51 | E1 ubiquitin-activating enzyme OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology