Basic Information
Locus ID:
GOSA_00001118
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
ATPase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig38 | 363082 | 375258 | + | GOSA_00001118 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 95,354.68 Da | 47.55 | 86.92 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 552 | 685 | 1.18129E-23 | - |
| Pfam | PF17862 | AAA+ lid domain | 707 | 749 | 1.0E-11 | IPR041569 |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 554 | 684 | 5.2E-39 | IPR003959 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 514 | 749 | 6.47E-61 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 686 | 749 | 2.4E-96 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 513 | 685 | 2.4E-96 | IPR027417 |
| SMART | SM00382 | AAA_5 | 550 | 687 | 2.6E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 657 | 676 | - | IPR003960 |
| PRINTS | PR00830 | Endopeptidase La (Lon) serine protease (S16) signature | 830 | 849 | 5.3E-6 | - |
| PRINTS | PR00830 | Endopeptidase La (Lon) serine protease (S16) signature | 558 | 577 | 5.3E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 778 | 793 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 476 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 436 | 495 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 778 | 797 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64110.2 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_010676392.2 | ribosome biogenesis ATPase RIX7 isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9P7J5 | Uncharacterized AAA domain-containing protein C24B10.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC24B10.10c PE=3 SV=1 | 0 | |
| TrEMBL | A0A0K9RKA8 | AAA domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_056920 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology