Basic Information
Locus ID:
GOSA_00000985
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig47 | 8818526 | 8824543 | - | GOSA_00000985 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 33,876.64 Da | 30.86 | 93.13 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07835 | STKc_CDK1_CdkB_like | 4 | 287 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 4 | 287 | 1.2E-80 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 290 | 2.7E-103 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 86 | 292 | 3.2E-74 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 84 | 1.1E-37 | - |
| SMART | SM00220 | serkin_6 | 4 | 287 | 1.2E-106 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 4 | 287 | 48.470444 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 123 | 135 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 10 | 33 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04110 (Cell cycle)
map04110 (Cell cycle)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
map04115 (p53 signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04218 (Cellular senescence)
map04218 (Cellular senescence)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G48750.1 | cell division control 2. A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. | 0 |
| RefSeq | XP_048497389.1 | cell division control protein 2 homolog [Beta vulgaris subsp. vulgaris] | 0 |
| P93101 | Cell division control protein 2 homolog OS=Oxybasis rubra OX=3560 GN=CDC2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9QNZ7 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_157980 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg36688, jg36690, jg7896 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_23012 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah023653 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg4233, Sbi_jg49570 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg5670 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00000985 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl10634, Sgl15886 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000013543, gene:ENSEOMG00000036260 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1AG0010150, CQ.Regalona.r1.1BG0015700 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30248430 |
| Apiaceae | Apium graveolens | 2 | Ag5G02831, Ag8G01439 |
| Arecaceae | Cocos nucifera | 2 | COCNU_07G007200, COCNU_09G001270 |
| Arecaceae | Phoenix dactylifera | 4 | gene-LOC103711126, gene-LOC103716855, gene-LOC103721375 ... |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_04.2995.V1.1, AsparagusV1_10.995.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri11G01568, Ftri5G12397 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G48750.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10005477m.g.v1.0, Thhalv10010585m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp5g13260.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB05g048910.2N, BniB06g023550.2N, BniB08g061990.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G2754 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl03G2895 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno14g04520 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0234s00004.v1.0, Dusal.4108s00001.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 5 | gene.Thate05g07900, gene.Thate05g07910, gene.Thate05g07920 ... |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG02.1231 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00015069 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb1G07135, Lb1G07140, Lb5G27760 |
| Poaceae | Echinochloa crus-galli | 6 | AH01.5089, AH07.221, BH01.5224, BH07.278, CH03.4636 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2AG0099850, gene-QOZ80_2BG0153300 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.4HG0413490.2, HORVU.MOREX.r3.6HG0550810.1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_003911, gene-QYE76_019852, gene-QYE76_071384 |
| Poaceae | Oryza coarctata | 4 | Oco03G001270, Oco04G001160, Oco05G001080, Oco06G001050 |
| Poaceae | Oryza sativa | 3 | LOC_Os02g03060.1, LOC_Os03g01850.1, LOC_Os03g02680.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_01G504700, gene-BS78_04G018600 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0100680, Pt_Chr0100770, Pt_Chr0201186 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr01G038740, Chr04G006260, Chr06G035740, Chr07G005370 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel4E01G580800, Tel6E01G181100 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC4BG059190, gene_TRIDC5AG074130 ... |
| Poaceae | Triticum aestivum | 5 | TraesCS4B02G353600.1, TraesCS4D02G347600.1 ... |
| Poaceae | Zea mays | 6 | Zm00001eb001260_P001, Zm00001eb203880_P001 ... |
| Poaceae | Zoysia japonica | 3 | nbis-gene-30079, nbis-gene-3139, nbis-gene-52138 |
| Poaceae | Zoysia macrostachya | 4 | Zma_g12107, Zma_g14862, Zma_g2232, Zma_g4567 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG06.1733, evm.TU.LG11.1086 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc06g11940 |
| Rhizophoraceae | Bruguiera sexangula | 3 | evm.TU.Scaffold_10_RagTag.1219, evm.TU.Scaffold_3_RagTag.910 ... |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-1104, nbisL1-mrna-17632 |
| Rhizophoraceae | Ceriops tagal | 3 | nbisL1-mrna-14585, nbisL1-mrna-14829, nbisL1-mrna-5922 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-17018, nbisL1-mrna-22654, nbisL1-mrna-6565 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000011l.914, evm.TU.utg000019l.654 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00006932, Maker00012764 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-15723, nbisL1-mrna-5118 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-19723, nbisL1-mrna-2927 |
| Salicaceae | Populus euphratica | 1 | populus_peu09232 |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132600348, gene-LOC132604216, gene-LOC132635831 |
| Solanaceae | Solanum chilense | 3 | SOLCI000711500, SOLCI002707000, SOLCI005533300 |
| Solanaceae | Solanum pennellii | 3 | gene-LOC107003205, gene-LOC107007603, gene-LOC107029008 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.271_chr01_- |
| Tamaricaceae | Tamarix chinensis | 1 | TC12G0253 |
| Zosteraceae | Zostera marina | 2 | Zosma01g31480.v3.1, Zosma05g33520.v3.1 |