Basic Information
Locus ID:
GOSA_00000702
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Serine threonine-protein kinase-like protein CCR4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig47 | 6020805 | 6022823 | - | GOSA_00000702 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 73,670.16 Da | 42.47 | 88.62 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 371 | 652 | 1.87014E-88 | - |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 104 | 125 | 1.5E-6 | - |
| Pfam | PF00069 | Protein kinase domain | 366 | 647 | 7.1E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 340 | 651 | 7.82E-73 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 19 | 204 | 1.7E-18 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 452 | 660 | 9.9E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 338 | 451 | 3.5E-30 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 11 | 224 | 2.5E-20 | IPR009091 |
| SMART | SM00220 | serkin_6 | 365 | 658 | 1.5E-23 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 365 | 663 | 36.583752 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 498 | 510 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 371 | 393 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_021760401.1 | serine/threonine-protein kinase-like protein CCR4 [Chenopodium quinoa] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M511 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology