Basic Information
Locus ID:
GOSA_00000283
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig47 | 2270285 | 2273266 | + | GOSA_00000283 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.64 | 74,177.78 Da | 30.76 | 95.63 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 66 | 4.6E-8 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 408 | 668 | 1.1E-31 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 141 | 201 | 2.9E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 25 | 236 | 5.95E-41 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 385 | 670 | 3.84E-50 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 482 | 674 | 9.6E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 140 | 8.7E-29 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 380 | 481 | 3.7E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 143 | 251 | 2.8E-31 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 403 | 671 | 25.5875 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 264 | 283 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021756271.1 | probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Chenopodium quinoa] | 0 |
| Q9SX31 | Proline-rich receptor-like protein kinase PERK9 OS=Arabidopsis thaliana OX=3702 GN=PERK9 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LI45 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology