Basic Information
Locus ID:
FtriNA23990
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Blue copper
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig00064 | 121688 | 123326 | + | FtriNA23990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.38 | 29,173.37 Da | 28.25 | 85.95 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 26 | 123 | 1.46112E-42 | - |
| CDD | cd04216 | Phytocyanin | 144 | 241 | 1.0025E-40 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 36 | 116 | 4.6E-22 | IPR003245 |
| Pfam | PF02298 | Plastocyanin-like domain | 154 | 234 | 5.7E-22 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 143 | 242 | 1.35E-30 | IPR008972 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 25 | 124 | 6.55E-32 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 142 | 243 | 1.7E-30 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 24 | 129 | 2.7E-32 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 26 | 125 | 37.157047 | IPR003245 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 144 | 243 | 35.727295 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17675.1 | Cupredoxin superfamily protein. Encodes a Plantacyanin/Basic blue family protein | 0 |
| RefSeq | XP_022024638.1 | blue copper protein 1b [Helianthus annuus] | 0 |
| A0A0M4FTF3 | Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1 | 0 | |
| TrEMBL | A0A251RU58 | Putative cupredoxin OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr17g0561421 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology