Basic Information
Locus ID:
FtriNA23651
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig00130 | 9284 | 24389 | - | FtriNA23651 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.13 | 97,187.86 Da | 34.74 | 95.55 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 561 | 827 | 9.28972E-91 | - |
| Pfam | PF13855 | Leucine rich repeat | 175 | 232 | 3.9E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 559 | 771 | 1.1E-47 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 22 | 325 | 4.25E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 541 | 838 | 2.91E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 533 | 630 | 2.4E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 218 | 333 | 1.6E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 9 | 115 | 4.9E-27 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 632 | 841 | 2.7E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 116 | 217 | 2.5E-20 | IPR032675 |
| SMART | SM00220 | serkin_6 | 555 | 827 | 3.6E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 555 | 828 | 38.845192 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 675 | 687 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 561 | 583 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_035830578.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Helianthus annuus] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N6NU97 | Protein kinase domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_17815 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology