Basic Information
Locus ID:
FtriNA22549
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
DnaJ molecular chaperone homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig01277 | 7732 | 12658 | + | FtriNA22549 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.94 | 67,030.84 Da | 66.21 | 58.25 | -0.92 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 75 | 119 | 4.35161E-7 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 85 | 127 | 1.5E-6 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 73 | 130 | 6.54E-9 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 77 | 174 | 3.1E-9 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 74 | 122 | 0.0042 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 107 | 126 | - | IPR018253 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 469 | 519 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 513 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 216 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 533 | 552 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 322 | 342 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 340 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 531 | 557 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 310 | - | - |
| Coils | Coil | Coil | 224 | 265 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G64360.2 | Chaperone DnaJ-domain superfamily protein. | 0 |
| RefSeq | XP_021993257.1 | homeobox protein 13 [Helianthus annuus] | 0 |
| TrEMBL | A0A5N6M0B1 | J domain-containing protein OS=Mikania micrantha OX=192012 GN=E3N88_35197 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology