Basic Information
Locus ID:
FtriNA19901
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig00760 | 30553 | 32896 | + | FtriNA19901 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.89 | 68,433.34 Da | 37.45 | 92.01 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 24 | 292 | 2.2E-41 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 363 | 515 | 7.8E-17 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 299 | 1.34E-71 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 339 | 555 | 2.22E-27 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 100 | 318 | 4.9E-59 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 438 | 593 | 1.7E-6 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 330 | 437 | 1.1E-18 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 99 | 3.8E-27 | - |
| SMART | SM00220 | serkin_6 | 22 | 295 | 2.8E-21 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 22 | 298 | 35.000744 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 359 | 596 | 15.396887 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 365 | 398 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 28 | 53 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 145 | 157 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G38990.1 | Malectin/receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_021981196.1 | probable LRR receptor-like serine/threonine-protein kinase At1g67720 isoform X1 [Helianthus annuus] | 0 |
| Q9FID9 | Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana OX=3702 GN=At5g38990 PE=2 SV=1 | 0 | |
| TrEMBL | A0A251V3U2 | Putative serine/threonine/dual specificity protein kinase, catalytic domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr03g0062941 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 9 | Ftri14G05518, Ftri14G19961, Ftri7G00942, Ftri7G02286 ... |