Basic Information
Locus ID:
FtriNA19628
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig03059 | 109096 | 112080 | + | FtriNA19628 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.96 | 68,884.75 Da | 38.25 | 86.58 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 312 | 587 | 7.2407E-106 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 281 | 573 | 4.6E-77 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 313 | 597 | 1.69E-59 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 315 | 596 | 1.5E-35 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 110 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 143 | 169 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 169 | - | - |
| Coils | Coil | Coil | 243 | 263 | - | - |
| Coils | Coil | Coil | 206 | 226 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_022018215.1 | probable galacturonosyltransferase 4 [Helianthus annuus] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A251RZG2 | Hexosyltransferase OS=Helianthus annuus OX=4232 GN=GAUT4 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology