Basic Information
Locus ID:
FtriNA18006
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig00371 | 26784 | 27733 | + | FtriNA18006 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.25 | 31,781.88 Da | 49.05 | 83.59 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 8 | 267 | 1.45223E-125 | - |
| Pfam | PF00069 | Protein kinase domain | 9 | 268 | 2.3E-71 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 270 | 2.97E-90 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 279 | 3.3E-90 | - |
| SMART | SM00220 | serkin_6 | 9 | 268 | 2.9E-92 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 2 | 265 | 1.4E-28 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 9 | 268 | 49.544628 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 15 | 38 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 130 | 142 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04012 (ErbB signaling pathway)
map04012 (ErbB signaling pathway)
ko04020 (Calcium signaling pathway)
map04020 (Calcium signaling pathway)
ko04024 (cAMP signaling pathway)
map04024 (cAMP signaling pathway)
ko04066 (HIF-1 signaling pathway)
map04066 (HIF-1 signaling pathway)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
map04217 (Necroptosis)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04745 (Phototransduction - fly)
map04745 (Phototransduction - fly)
ko04750 (Inflammatory mediator regulation of TRP channels)
map04750 (Inflammatory mediator regulation of TRP channels)
ko04916 (Melanogenesis)
map04916 (Melanogenesis)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04530.1 | phosphoenolpyruvate carboxylase kinase 2. Encodes a second Arabidopsis phosphoenolpyruvate carboxylase kinase gene product with a different expression pattern from PPCK1. Expression of the gene is upregulated by exposure of the plant to light. | 0 |
| RefSeq | XP_021992450.1 | phosphoenolpyruvate carboxylase kinase 1 [Helianthus annuus] | 0 |
| Q93VK0 | Phosphoenolpyruvate carboxylase kinase 2 OS=Arabidopsis thaliana OX=3702 GN=PPCK2 PE=1 SV=2 | 0 | |
| TrEMBL | Q8W5R4 | Phosphoenolpyruvate carboxylase kinase OS=Flaveria trinervia OX=4227 GN=PEPC-PK PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology