halophFGD

Basic Information

Locus ID: FtriNA13922

Species & Taxonomic ID: Flaveria trinervia & 4227

Genome Assembly: GCA_025506515.1

Description: Protein FAR1-RELATED SEQUENCE 5-like

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Contig03099	185234	186741	+	FtriNA13922

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.76	49,504.99 Da	38.55	90.73	-0.23

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF10551	MULE transposase domain	1	80	4.2E-17	IPR018289
SMART	SM00575	26again6	284	311	4.1E-4	IPR006564
ProSiteProfiles	PS50966	Zinc finger SWIM-type profile.	273	309	10.43494	IPR007527

Gene Ontology

Molecular Function:

GO:0008270 (zinc ion binding)

KEGG Pathway

KO Term:

K17604 (zinc finger SWIM domain-containing protein 3)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G76320.3	-
RefSeq	XP_022007801.1	protein FAR1-RELATED SEQUENCE 5-like [Helianthus annuus]
Swiss-Prot	Q6NQJ7	Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana OX=3702 GN=FRS4 PE=2 SV=2
TrEMBL	A0A251SJ10	Protein FAR1-RELATED SEQUENCE OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr14g0449641 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Asteraceae	Flaveria trinervia	44	Ftri10G11617, Ftri10G29163, Ftri11G07361, Ftri11G18246 ... Ftri11G28932, Ftri12G02740, Ftri12G23135, Ftri12G30949, Ftri12G31882, Ftri13G00300, Ftri13G02788, Ftri13G14475, Ftri14G08431, Ftri14G17396, Ftri14G24276, Ftri15G17861, Ftri15G23176, Ftri15G26300, Ftri16G02063, Ftri16G05055, Ftri16G11082, Ftri16G11904, Ftri16G22178, Ftri16G22966, Ftri16G29932, Ftri16G32504, Ftri17G07867, Ftri2G01229, Ftri3G05569, Ftri4G07590, Ftri4G10090, Ftri4G15855, Ftri4G18820, Ftri5G06459, Ftri5G23007, Ftri6G19831, Ftri7G15215, Ftri7G18898, Ftri7G21702, Ftri8G00461, Ftri8G00988, FtriNA13922, FtriNA22465, FtriNA26942