Basic Information
Locus ID:
FtriNA11919
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig00064 | 86701 | 87653 | + | FtriNA11919 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.43 | 16,459.95 Da | 21.32 | 88.78 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 26 | 124 | 5.59771E-38 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 36 | 117 | 1.7E-19 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 25 | 125 | 1.42E-28 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 23 | 126 | 4.5E-28 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 26 | 126 | 31.445147 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_022024638.1 | blue copper protein 1b [Helianthus annuus] | 0 |
| A0A072U307 | Blue copper protein 1b OS=Medicago truncatula OX=3880 GN=BCP1B PE=2 SV=1 | 0 | |
| TrEMBL | A0A251RU58 | Putative cupredoxin OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr17g0561421 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology