Basic Information
Locus ID:
FtriNA09558
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the monovalent cation proton antiporter 1 (CPA1) transporter (TC 2.A.36) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig00931 | 12956 | 19128 | + | FtriNA09558 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 58,393.84 Da | 32.89 | 113.12 | 0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 28 | 440 | 1.1E-59 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 142 | 194 | 4.4E-16 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 23 | 444 | 1.3E-75 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 81 | 92 | 1.8E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 110 | 118 | 1.8E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 95 | 109 | 1.8E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 150 | 160 | 1.8E-11 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_022040498.1 | sodium/hydrogen exchanger 3 [Helianthus annuus] | 0 |
| Q9SXJ8 | Sodium/hydrogen exchanger 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NHX1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A251VKT9 | Putative na+/H+ exchanger, Cation/H+ exchanger, Cation/H+ exchanger, CPA1 family OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr01g0002041 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology