Basic Information
Locus ID:
FtriNA05982
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig01141 | 15328 | 21121 | - | FtriNA05982 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 102,730.23 Da | 31.05 | 92.59 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 627 | 893 | 4.85957E-94 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 625 | 889 | 1.1E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 607 | 902 | 4.78E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 55 | 422 | 1.19E-45 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 183 | 1.0E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 283 | 411 | 7.7E-18 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 596 | 696 | 1.5E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 697 | 910 | 3.5E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 184 | 282 | 1.3E-17 | IPR032675 |
| SMART | SM00220 | serkin_6 | 621 | 894 | 6.5E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 621 | 894 | 38.025421 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 741 | 753 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 627 | 649 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 901 | 930 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 898 | 941 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_022028095.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Helianthus annuus] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251V5Y6 | Putative leucine-rich repeat protein kinase family protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr03g0070831 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology