Basic Information
Locus ID:
FtriNA05498
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig00030 | 90477 | 93181 | + | FtriNA05498 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.43 | 56,510.67 Da | 44.97 | 98.36 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 250 | 434 | 6.2E-26 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 249 | 477 | 4.37E-47 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 61 | 165 | 3.44E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 20 | 167 | 1.6E-26 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 315 | 494 | 9.1E-36 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 243 | 314 | 6.0E-16 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 211 | 507 | 20.85261 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58300.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021982088.1 | probable inactive receptor kinase At5g58300 [Helianthus annuus] | 0 |
| Q9LVM0 | Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana OX=3702 GN=At5g58300 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251TUA0 | Protein kinase domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr09g0252631 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 2 | FtriNA05498, FtriNA26658 |