Basic Information
Locus ID:
FtriNA04448
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig03070 | 91171 | 94221 | + | FtriNA04448 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.16 | 38,578.90 Da | 38.33 | 94.04 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 2 | 282 | 1.17315E-97 | - |
| Pfam | PF00069 | Protein kinase domain | 2 | 277 | 2.1E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 279 | 1.45E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 84 | 322 | 2.6E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 83 | 6.2E-23 | - |
| PIRSF | PIRSF000615 | TyrPK_CSF1-R | 249 | 316 | 21.0 | - |
| PIRSF | PIRSF000615 | TyrPK_CSF1-R | 1 | 82 | 18.0 | - |
| PIRSF | PIRSF000615 | TyrPK_CSF1-R | 74 | 208 | 8.6E-13 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 283 | 40.597809 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 2 | 31 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39110.2 | - | 0 |
| RefSeq | XP_021976937.1 | serine/threonine-protein kinase PCRK1 isoform X2 [Helianthus annuus] | 0 |
| Q9SF86 | Serine/threonine-protein kinase PCRK1 OS=Arabidopsis thaliana OX=3702 GN=PCRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251U3W3 | Protein kinase domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr08g0218661 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology