Basic Information
Locus ID:
FtriNA03406
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig02495 | 181013 | 188167 | - | FtriNA03406 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.42 | 179,818.39 Da | 44.91 | 75.90 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15725 | FYVE_PIKfyve_Fab1 | 33 | 101 | 2.9759E-31 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1322 | 1573 | 1.87487E-138 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 334 | 592 | 1.46913E-118 | - |
| Pfam | PF01363 | FYVE zinc finger | 34 | 104 | 3.9E-17 | IPR000306 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1361 | 1515 | 1.2E-26 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 404 | 587 | 6.7E-19 | IPR002423 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1319 | 1573 | 1.9E-73 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 405 | 558 | 5.76E-33 | IPR027409 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 32 | 105 | 1.25E-18 | IPR011011 |
| Gene3D | G3DSA:3.30.810.10 | - | 1444 | 1574 | 3.0E-34 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 26 | 109 | 3.2E-20 | IPR013083 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1303 | 1441 | 8.2E-38 | IPR027484 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 403 | 558 | 3.6E-40 | IPR027409 |
| SMART | SM00330 | PIPK_2 | 1298 | 1574 | 3.9E-108 | IPR002498 |
| SMART | SM00064 | fyve_4 | 29 | 105 | 2.8E-19 | IPR000306 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1257 | 1573 | 48.94659 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 37 | 104 | 12.693618 | IPR017455 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1584 | 1604 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1135 | 1154 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 669 | 711 | - | - |
| Coils | Coil | Coil | 972 | 1003 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_022033518.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B [Helianthus annuus] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A251UU90 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Helianthus annuus OX=4232 GN=FAB1C PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology