Basic Information
Locus ID:
FtriNA00074
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Blue copper
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig00749 | 16541 | 18178 | - | FtriNA00074 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.32 | 29,296.46 Da | 30.27 | 83.81 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 26 | 124 | 1.03169E-32 | - |
| CDD | cd04216 | Phytocyanin | 145 | 242 | 6.00911E-41 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 155 | 235 | 5.7E-22 | IPR003245 |
| Pfam | PF02298 | Plastocyanin-like domain | 36 | 117 | 1.4E-14 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 144 | 243 | 1.45E-30 | IPR008972 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 25 | 125 | 4.89E-24 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 24 | 130 | 7.1E-26 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 143 | 244 | 1.7E-30 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 26 | 126 | 27.49732 | IPR003245 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 145 | 244 | 35.727295 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17675.1 | Cupredoxin superfamily protein. Encodes a Plantacyanin/Basic blue family protein | 0 |
| RefSeq | XP_022024638.1 | blue copper protein 1b [Helianthus annuus] | 0 |
| A0A0M4FTF3 | Blue copper protein OS=Petunia hybrida OX=4102 GN=BCP PE=2 SV=1 | 0 | |
| TrEMBL | A0A251RU58 | Putative cupredoxin OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr17g0561421 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology