Basic Information
Locus ID:
Ftri9G33260
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Short Name:
IAA16
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 3897628 | 3899854 | + | Ftri9G33260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.62 | 25,458.90 Da | 35.60 | 73.81 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 7 | 222 | 3.1E-66 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 104 | 188 | 3.63E-14 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 98 | 225 | 8.6E-34 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 99 | 213 | 15.805511 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_023733419.1 | auxin-responsive protein IAA16 [Lactuca sativa] | 0 |
| O24407 | Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2U1NWH3 | Auxin-responsive protein OS=Artemisia annua OX=35608 GN=CTI12_AA219180 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology