Basic Information
Locus ID:
Ftri9G29358
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 88754672 | 88756145 | + | Ftri9G29358 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.75 | 40,942.29 Da | 28.84 | 85.70 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 276 | 353 | 1.42E-7 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 197 | 262 | 4.19E-6 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 45 | 144 | 1.7E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 255 | 356 | 2.7E-12 | - |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 225 | 258 | - | IPR017441 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G76360.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_043614184.1 | receptor like protein kinase S.2-like isoform X2 [Erigeron canadensis] | 0 |
| P27450 | Probable serine/threonine-protein kinase CST OS=Arabidopsis thaliana OX=3702 GN=CST PE=1 SV=2 | 0 | |
| TrEMBL | A0A251U462 | Putative serine/threonine/dual specificity protein kinase, catalytic domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr08g0216461 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 6 | Ag1G01892, Ag1G01893, Ag1G01894, Ag1G01896, Ag1G01897 ... |
| Asteraceae | Flaveria trinervia | 8 | Ftri6G13736, Ftri7G15621, Ftri8G01115, Ftri8G26217 ... |