Basic Information
Locus ID:
Ftri9G29041
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
Domain of unknown function (DUF569)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 82901146 | 82908214 | - | Ftri9G29041 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.26 | 55,519.63 Da | 50.52 | 73.31 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04601 | Domain of unknown function (DUF569) | 1 | 125 | 1.4E-38 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 207 | 352 | 2.1E-70 | IPR007679 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 8 | 123 | 9.81E-16 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 210 | 355 | 1.44E-24 | IPR008999 |
| Gene3D | G3DSA:2.80.10.50 | - | 5 | 125 | 1.8E-13 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 215 | 339 | 1.3E-18 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 379 | 404 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 379 | 401 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G27100.1 | Actin cross-linking protein. | 0 |
| RefSeq | XP_024989825.1 | uncharacterized protein LOC112524287 [Cynara cardunculus var. scolymus] | 0 |
| TrEMBL | A0A2J6KNR7 | Actin cross-linking OS=Lactuca sativa OX=4236 GN=LSAT_8X163401 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology