Basic Information
Locus ID:
Ftri9G27197
Species & Taxonomic ID:
Flaveria trinervia & 4227
Genome Assembly:
GCA_025506515.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 83766646 | 83769621 | + | Ftri9G27197 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.06 | 50,222.33 Da | 39.38 | 82.14 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 194 | 236 | 4.0E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 194 | 237 | 1.02E-8 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 242 | 302 | 3.92E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 195 | 316 | 1.7E-9 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 187 | 234 | 10.053852 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26000.1 | Ribonuclease inhibitor. | 0 |
| RefSeq | XP_021975940.1 | F-box protein SKIP14 [Helianthus annuus] | 0 |
| Q9LU91 | F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251U0W8 | Putative F-box domain, Leucine-rich repeat domain, L domain-like protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr08g0207341 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology